I'm trying to run a simple job using the "RunProtocol" script on a linux server.  I can get the protocol to run properly, and I can track its progress in the jobs directory in my Accelrys installation.  The problem that I'm having is the the job directory is deleted after the job is finished, and so I can't access the results.

Here's how I'm running the protocol (after logging into the linux server):

/opt/software/Accelrys/linux_bin/runprotocol ./PrepareProtein.xml -p "Input Protein=/home/myusername/tmp/test_pipeline/mypdb.pdb" -results "./output.xml"

(I have already source ppvars.sh as explained in the documentation).

I get an output file (output.xml) that does make reference to my output files, but that directory no longer exists.

Is there a setting or parameter that will retain my job after completion (when run from my linux server)?  Ideally, I'd prefer to not have to modify the Protocol (e.g. copying results files).

Thanks!