Hello Everyone,
First thanks for your attention on this question.
I built a mixture in Amorphous cell, with 50 A molecules (CxHyOz) and 50 B molecules (CxHyNz).
My question is, if I would like to calculate RDF between A and B, what should I do?
My current method is to select all A molecules as Set 1, and select all B molecules as Set 2, then using Forcite-RDF module. Is it correct, and this RDF is atoms-atoms RDF or centroid-centroid RDF? do I have to creat a centroid any more?
By the way, If I want to study A-A interaction/structure, when I choose set 1 and set 1 in Sets, do I have to check "Include intra-intermolecular components"?
Thanks in advance,
best,
Guangji
First thanks for your attention on this question.
I built a mixture in Amorphous cell, with 50 A molecules (CxHyOz) and 50 B molecules (CxHyNz).
My question is, if I would like to calculate RDF between A and B, what should I do?
My current method is to select all A molecules as Set 1, and select all B molecules as Set 2, then using Forcite-RDF module. Is it correct, and this RDF is atoms-atoms RDF or centroid-centroid RDF? do I have to creat a centroid any more?
By the way, If I want to study A-A interaction/structure, when I choose set 1 and set 1 in Sets, do I have to check "Include intra-intermolecular components"?
Thanks in advance,
best,
Guangji