Hello Everyone, I am trying to edit LAMMPS data file in PCFF format. While using PCFF for my system. I found PCFF use automatic parameters for some combinations like
Bond Stretch : (c2 nb)
While I look LAMMPS data file, I found that for given combination, coefficients are missing
Bond Coeffs # class2
10 0.0000 000.0000 0.0000 0.0000 # c2-nb
so I edited the parameters using auto equivalency method. I did same for Angle Bend, Torsion. But combination for Inversion doesn't match which was not case with Bond stretch, Angle bend, Torsion.
Why are they different from each other?
MS uses the automatic parameters for combination (nb c2 c2 cp), (nb c2 cp c2), (nb c2 cp hn), (nb cp hn c2), (nb hn c2 cp). But LAMMPS data file shows missing improper coefficients for different combinations that was not case with Bond Stretch, Angle Bend, Torsion.
Energy contributors using automatic parameters:
Inversion : (nb c2 c2 cp), (nb c2 cp c2), (nb c2 cp hn), (nb cp hn c2),
: (nb hn c2 cp)
But in LAMMPS
Improper Coeffs # class2
1 7.8153 0.0000 # c2-cp-cp-cp
2 4.8912 0.0000 # cp-cp-cp-hc
3 13.0421 0.0000 # cp-cp-cp-oc
4 7.8153 0.0000 # cp-cp-cp-c3
5 10.7855 0.0000 # cp-cp-cp-nb
6 0.0000 0.0000 # c2-nb-c2-cp
7 0.0000 0.0000 # c2-nb-cp-hn
8 0.0000 0.0000 # cp-nb-hn-hn
9 0.0000 0.0000
10 0.0000 0.0000
11 0.0000 0.0000
...
31 0.0000 0.0000
Thanks,
Ankit