Hello, Was wondering if anyone has tried making a picture like this in PP (http://www.biofocus.com/userfiles/file/presentations/MipTec_AndreasBergner_final1.pdf)

slide number 10.

This was done by Bajoraths scripts of Saranea (http://pubs.acs.org/doi/abs/10.1021/ci900416a).

In short, it takes selected scaffolds and give them a specific color, then it takes second set of compounds (lets say active compounds similar to those selected scaffolds) and color them in a different color, and finally reads another set of compounds (a general dataset of compounds) and colors them differently. All the three sets are shown in a network like graph picture based on their FP similarity...

Any suggestions?

Thank you

nar