Does anyone know how to coax Pipeline Pilot using R to write out the complete hierarchical tree linkage for molecules from hierarchical clustering? By linkage, I mean a string of numbers such as 1.2.7.3.12 for compound 1, 1.2.7.3.11 for another compound and so on. This sequence of numbers tells the reader where the compound is with respect to the branches in the tree hierarchy.
I have been trying to get the R agnes clustering component to output this information (or something similar) with no success.
I would be most grateful if someone can figure this out!

Regards,
Jim Metz
Abbott Laboratories

James.Metz@Abbott.com
(847) 936-0441