Get in a report info from a mol2 file and a text file

Hi,

I make some calculations on a protocol and at the end I want to have a report with information from different files; mol2 files and text files where one can see in a html file, each molecule graphically and below the associated text.
In my protocol everything is correctly calculated and at the end I try to join both kind of files using "join data from file", but my problem is that I need a column name from the mol2 file and another column name from the text file in order to join both of them and I do not use these column names. So, is it there a better way to mix both files ?

Thanks

WS