Cytoscape Viewer

Name: Cytoscape viewer
Author: Pedro Gomez-Fabre
Version: 1.1
Created: 1/2014

Purpose: This protocol displays cytoscape .sif files.
Requirements: Pipeline Pilot 9.0 or later
Cytoscape 2.8 (http://www.cytoscape.org/release_notes_2_8_2.html).

O/S: Windows and Linux
Limitations: none known

Keyword: Bioinformatics, Gene Expression, interaction networks.
Contents: cytoscape protocol.xml

Installation:

1. Download component and import into Pipeline Pilot

2. You must install Cytoscape on your client machine and point the viewer to the installation location. Your reader should point to any of the .sif files existing on your cytoscape installation folder.