Name: Bibliography Platform for PubMed
Author: Stephane Vellay, Nancy Latimer, Guillaume Paillard
Version: 1.0
Created: 21 Nov 2008

Purpose: We show an example of Bibliography Platform that can be used to support virtually any use case in an agile manner. Here we focus on a Pipeline Pilot web-based application that interactively analyzes and reports on PubMed search results. This will be of interest to any scientist to help identify the most relevant papers in a topical area more quickly and to evaluate the results of query refinement. Links with Entrez databases help both the biologist and the chemist alike.

Requirements:

• Pipeline Pilot 7.5
  
• Text Analytics Collection
  
• R-Statistics Collection
  
• Reporting Collection
  

Keyword: text mining, document classification, document search, PubMed
Contents: Bibliography Platform.xml

Installation:
1. Unzip the archive
2. If not already there, create a folder named "Text Analytics" under "Protocols/Web Services"
3. Import the xml file in this folder by dragging and dropping it in the Explorer window of your Pipeline Pilot client
4. Run it & enjoy

Please send me your feedback/bugs/requests