Hi everyone
I use DMol3 to optimize my structure.And I submit my job to workstation where has MS 6.0 intalled.But the job stoped in first step with this error"rank 3 in job 1 node01_44425 caused collective abort of all ranks exit status of rank 3: killed by signal 6".At first, I thought it was lack of memory,howerever, I still got this error when the Max_memory was increased to 20 G .I used GGA to optimize my structure, it is ok, but when I changed to b3lyp I got this error.What is wrong?Here is my input and part of my output.The attachment is my structure opitimized with GGA.
# Task parameters
Calculate optimize
Opt_energy_convergence 2.0000e-005
Opt_gradient_convergence 4.0000e-003 A
Opt_displacement_convergence 5.0000e-003 A
Opt_iterations 200
Opt_max_displacement 0.3000 A
Initial_hessian improved
Symmetry off
Max_memory 20480
# Electronic parameters
Spin_polarization unrestricted
Spin 0
Charge 0
Basis dnd
Pseudopotential none
Functional b3lyp umesh=xcoarse minu=-3
Aux_density octupole
Integration_grid medium
Occupation thermal 0.0050
Cutoff_Global 3.3000 angstrom
Scf_density_convergence 1.0000e-005
Scf_charge_mixing 0.2000 10. 301
Scf_spin_mixing 0.5000
Scf_iterations 300
Scf_diis off
# Print options
Print eigval_last_it
# Calculated properties
Print_eigval_window -1.d9
Plot homo
Plot lumo
Plot density
Grid msbox 3 0.2500 0.2500 0.2500 3.0000
output
Message: Generating delocalized internals
MDF file does not exist.
Generating automatic internal coordinates.
Message: Number degrees of freedom was redefined 225
*** OPTIMIZATION USES DELOCALIZED INTERNALS ***
The preliminary size of active space is : 225
There are : 225 degrees of freedom
There are likely: 493 primitive internals
Message: Generation of delocalized internals is successful
Message: Generating Coulomb integrals
Checked out license feature: MS_dmol_site [for msi] (1 copy)
rank 3 in job 1 node01_44425 caused collective abort of all ranks
exit status of rank 3: killed by signal 6
DMol3.pl message: DMol3 job finished in 2 hr 2 min 51 sec.

I use DMol3 to optimize my structure.And I submit my job to workstation where has MS 6.0 intalled.But the job stoped in first step with this error"rank 3 in job 1 node01_44425 caused collective abort of all ranks exit status of rank 3: killed by signal 6".At first, I thought it was lack of memory,howerever, I still got this error when the Max_memory was increased to 20 G .I used GGA to optimize my structure, it is ok, but when I changed to b3lyp I got this error.What is wrong?Here is my input and part of my output.The attachment is my structure opitimized with GGA.
# Task parameters
Calculate optimize
Opt_energy_convergence 2.0000e-005
Opt_gradient_convergence 4.0000e-003 A
Opt_displacement_convergence 5.0000e-003 A
Opt_iterations 200
Opt_max_displacement 0.3000 A
Initial_hessian improved
Symmetry off
Max_memory 20480
# Electronic parameters
Spin_polarization unrestricted
Spin 0
Charge 0
Basis dnd
Pseudopotential none
Functional b3lyp umesh=xcoarse minu=-3
Aux_density octupole
Integration_grid medium
Occupation thermal 0.0050
Cutoff_Global 3.3000 angstrom
Scf_density_convergence 1.0000e-005
Scf_charge_mixing 0.2000 10. 301
Scf_spin_mixing 0.5000
Scf_iterations 300
Scf_diis off
# Print options
Print eigval_last_it
# Calculated properties
Print_eigval_window -1.d9
Plot homo
Plot lumo
Plot density
Grid msbox 3 0.2500 0.2500 0.2500 3.0000
output
Message: Generating delocalized internals
MDF file does not exist.
Generating automatic internal coordinates.
Message: Number degrees of freedom was redefined 225
*** OPTIMIZATION USES DELOCALIZED INTERNALS ***
The preliminary size of active space is : 225
There are : 225 degrees of freedom
There are likely: 493 primitive internals
Message: Generation of delocalized internals is successful
Message: Generating Coulomb integrals
Checked out license feature: MS_dmol_site
rank 3 in job 1 node01_44425 caused collective abort of all ranks
exit status of rank 3: killed by signal 6
DMol3.pl message: DMol3 job finished in 2 hr 2 min 51 sec.
