Hey
Can anyone help me with the Kinetix configuration file?
We have the Carlos-4.4 ( which is now the Kinetix in MS6.0), i have run simulations using that for my enzyme substrate structure for methanol oxidation mechanism. I want to build a similar file in Kinetix but
unable to do so. ( attached is the picture) . Please Can someone help me out.
{For the Configuration file in Carlos: The xyz coordinates of all the amino acids in the enzyme were obtained, ran a C-code and 2D grid (neglecting y axis coordinates) was prepared.
The green dots are the active site amino acids and the other black dots correspond to the other amino acids in the enzyme.}