The amino acid residue hydrophobicity values used in the Calculate Protein Aggregation Scores protocol are normalized hydrophobicity scale based on (Black S. D. and Mould D.R., Anal. Biochem., 1991, 193(1), 72-82), such that glycine has the hydrophobicity value of zero, and more hydrophobic amino acids have more positive values:

PHE        0.499

ILE          0.442

LEU        0.442

TYR         0.379

TRP        0.377

VAL        0.324

MET       0.237

PRO       0.21

CYS        0.179

ALA        0.115

GLY        0

THR       -0.051

SER       -0.142

LYS        -0.218

GLN       -0.25

ASN       -0.265

HIS         -0.336

GLU       -0.458

ASP       -0.473

ARG       -0.501