Hello,
I have some problem while doing docking. I prepared well proteins and ligands and it worked well when I choose define site of receptor from receptor cavities (option available in GOLD in DS platform) but when I choose single atom or single residue (and made a sphere from there) I didn't get a single posses. So, could you please let me know what should I have to follow when chosing the particular single atom or a single residue?
Thanks!
Keshav