How to Prepare Germline Source from antibody fasta file?

Hi, all

Recently, I've collected 940  antibody sequences contain approved and under investigation, and want to use them in humanization.

Prepare Germline Source protocol need to input the V and J gene sequences of VH and VL-kappa/lambda, if I use annotate antibody protocol to identify the germline sequences which means I need to copy and paste them to a new file one by one (see attachment). So is there any shortcut to simply prepare germline source directly from the antibody sequence?

 

Halen