Dear All
I would like to get answers for the following questions:
1) How can I view which residue is involved in an binding interface after zdock running?
2) I' ve tried to refine zdock results with rdock. I applied Charm H polar force field and i get The followiong error
Unknown atom type ARG:HE2 for ACE solvation calculation in residue :ARG251
How can I fix it? If I clean protein, the force field is removed
3) How can I save a ligand-receptor docked pose to a pdb file?
Thanks in advance