I have problem regarding this module
I checked the success of mapping using the mapping ligand to pharmacophore module and maxomitfeature equals 1 and it successfully mapped
when i try to input this structure into the docking module and put the same pharmacophore it gives 0 refined poses
I tried to do something to confirm success of cdocker to dock such structure :
I used cdocker and set conformation to false to dock the cpd with the mapped pose I got from pharmacophore alignment and it proceeds through simulated annealing and gave me 10 poses
I dont't know why when i use the combined module,it gives 0 pose
I checked the success of mapping using the mapping ligand to pharmacophore module and maxomitfeature equals 1 and it successfully mapped
when i try to input this structure into the docking module and put the same pharmacophore it gives 0 refined poses
I tried to do something to confirm success of cdocker to dock such structure :
I used cdocker and set conformation to false to dock the cpd with the mapped pose I got from pharmacophore alignment and it proceeds through simulated annealing and gave me 10 poses
I dont't know why when i use the combined module,it gives 0 pose