G'day,

I have a protocol that reads CHIME or MOL v3000 format compounds that include highlighting information, e.g.

...
M V30 BEGIN COLLECTION
M V30 MDLV30/HILITE BONDS=(6 27 36 44 47 49 50)
M V30 END COLLECTION
...

When converted to a Molecule in Pipeline Pilot, e.g. using Molecule from CHIME, these highlighted bonds become Bond Properties, namely HighlightColor, e.g.

BondIndex HighlightColor
...
6 0,0,255
...

Is there some way to specify what the highlight colour should be?

Note, I can read and overwrite the HighlightColor property with a custom colour but I'd appreciate not having to do so.

Thanks,
Chris.