This protocol creates a Heat Map showing the number of interactions involving interfacing residues over a trajectory. The protocol parameters are the same as those in the Analyze Protein Interface protocol. The output is the Heat map plot (similar to the one shown below) in the job Report and a csv file containing the same data.​​​​​​​ Beware of using a trajectory with too many conformations otherwise the Heatmap will just a black box. The one below contains data for 20 conformations. 

USAGE: This protocol can be launched from either the Discovery Studio and Pipeline Pilot clients. To install in Discovery Studio, go to the Protocol Explorer, right-click over your user folder, choose Import, navigate to the location of the HeatMapInterfaceInteractionsTrajectory.ppxml file and enter it as the File Name. You may need to right click and choose Refresh to see the new protocol in your list.

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